zh:notes:topic_extraction_mmsb
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zh:notes:topic_extraction_mmsb [2018/05/13 17:02] pzczxs [Tools] |
zh:notes:topic_extraction_mmsb [2022/06/30 11:32] (当前版本) pzczxs 讨论状态变化了 |
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| data source: [[http://www.topic-challenge.info|Topic Extraction Challenge]] | data source: [[http://www.topic-challenge.info|Topic Extraction Challenge]] | ||
| - | astro: data directory | + | ===== Citation Information ===== |
| + | Shuo Xu, Junwan Liu, Dongsheng Zhai, Xin An, Zheng Wang, and Hongshen Pang, 2018. [[https://doi.org/10.1007/s11192-018-2841-4|Overlapping Thematic Structures Extraction with Mixed-Membership Stochastic Blockmodel]]. //Scientometrics//, Vol. 117, No. 1, pp. 61-84. {{:resources:datasets:xlza_2018.zip|Results}} | ||
| + | |||
| + | ===== Notes ===== | ||
| + | |||
| + | astro: data directory | ||
| tools: tool directory | tools: tool directory | ||
| 行 12: | 行 17: | ||
| *[[http://networkx.github.io/|NetworkX]] | *[[http://networkx.github.io/|NetworkX]] | ||
| *[[:zh:notes:running_jate2|JATE 2.0]] | *[[:zh:notes:running_jate2|JATE 2.0]] | ||
| - | *[[http://scikit-learn.org/|scikit-Learn]] | + | *[[http://scikit-learn.org/|scikit-learn]] |
| *[[https://gephi.org/|Gephi]] | *[[https://gephi.org/|Gephi]] | ||
| *[[http://www.vosviewer.com/|VOSViewer]] | *[[http://www.vosviewer.com/|VOSViewer]] | ||
| + | *Matlab | ||
| + | *SPSS | ||
| =====Generate citation-link network as edge lists===== | =====Generate citation-link network as edge lists===== | ||
| <code bash> | <code bash> | ||
| 行 91: | 行 98: | ||
| > index = GiniIndex('../astro/direct.edgelist.giant.degree', '../astro/coupling.edgelist.giant.degree', '../astro/cocitation.edgelist.giant.degree') | > index = GiniIndex('../astro/direct.edgelist.giant.degree', '../astro/coupling.edgelist.giant.degree', '../astro/cocitation.edgelist.giant.degree') | ||
| </code> | </code> | ||
| - | *Statistics about uncovered communities: min, max, avg, and median | + | *Statistics about uncovered communities: min, max, avg, median, and standard variance |
| <code bash> | <code bash> | ||
| > python statistics.py ../astro/n101831-k2396-mmsb-linksampling/communities.txt | > python statistics.py ../astro/n101831-k2396-mmsb-linksampling/communities.txt | ||
| 行 101: | 行 108: | ||
| > python statistics.py ../astro/n82895-k113-mmsb-linksampling/communities.txt | > python statistics.py ../astro/n82895-k113-mmsb-linksampling/communities.txt | ||
| </code> | </code> | ||
| + | *Distribution of the cluster size | ||
| + | <code matlab> | ||
| + | > load cluster_size | ||
| + | > cluster_size_distribution(direct_2396(:, 2), 100, 100) | ||
| + | > cluster_size_distribution(coupling_992(:, 2), 100, 100) | ||
| + | > cluster_size_distribution(cocitation_634(:, 2), 100, 100) | ||
| + | > cluster_size_distribution(direct_113(:, 2), 50, 200) | ||
| + | > cluster_size_distribution(coupling_113(:, 2), 50, 200) | ||
| + | > cluster_size_distribution(cocitation_113(:, 2), 50, 200) | ||
| + | </code> | ||
| + | |||
| + | Q-Q (Quantile-Quantile) Plot: Analyze-->Discriptive Statistics-->Explore-->Plots, //Normality plots with tests// with selected. | ||
| *Distribution of the number of memberships of nodes | *Distribution of the number of memberships of nodes | ||
| <code bash> | <code bash> | ||
| 行 112: | 行 131: | ||
| </code> | </code> | ||
| *Overlaps between thematic structures at a high level | *Overlaps between thematic structures at a high level | ||
| + | <code bash> | ||
| + | > java -jar AstroConverter.jar Overlap -threshold 150 -input ../astro/n101831-k113-mmsb-linksampling/communities.txt -output ../astro/direct | ||
| + | > java -jar AstroConverter.jar Overlap -threshold 200 -input ../astro/n101053-k113-mmsb-linksampling/communities.txt -output ../astro/coupling | ||
| + | > java -jar AstroConverter.jar Overlap -threshold 200 -input ../astro/n82895-k113-mmsb-linksampling/communities.txt -output ../astro/cocitation | ||
| + | </code> | ||
| Screenshot -> Save -> EPS (Encapsulated PostScript) files (*.eps) | Screenshot -> Save -> EPS (Encapsulated PostScript) files (*.eps) | ||
| 行 157: | 行 181: | ||
| --> | --> | ||
| - | ~~DISCUSSION~~ | + | ~~DISCUSSION:closed~~ |
zh/notes/topic_extraction_mmsb.1526202161.txt.gz · 最后更改: 2018/05/13 17:02 由 pzczxs